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An Introduction to Molecular Docking

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  • What is the introduction of molecular docking?

    Abstract.
    Molecular docking is a key tool in structural molecular biology and computer-assisted drug design.
    The goal of ligand-protein docking is to predict the predominant binding mode(s) of a ligand with a protein of known three-dimensional structure.

  • What is molecular docking PDF?

    Molecular Docking is the computational modeling of the structure of complexes formed by two or more interacting molecules.
    The goal of molecular docking is the prediction of the three dimensional structures of interest.
    Docking itself only produces plausible candidate structures.

  • What are the basic steps in molecular docking?

    The docking process involves two basic steps: prediction of the ligand conformation as well as its position and orientation within these sites (usually referred to as pose) and assessment of the binding affinity.

  • There are various kinds of molecular docking procedures involving either ligand/target flexible or rigid based upon the objectives of docking simulations [6,7] like flexible ligand docking (target as rigid molecule), rigid body docking (both the target and ligand as rigid molecules) and flexible docking (both

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An Introduction to Molecular Docking