methanol fixation protocol


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PDF Methanol Fixation of Cells for Single Cell RNA Sequencing

This protocol outlines methanol fixation and rehydration of single cell suspensions for use with 10x Genomics Single Cell protocols

PDF Cell fixation and preservation (methanol) for 10x Genomics single

16 oct 2020 · Using this methanol fixation approach high-quality single-cell transcriptomes from cells stored DEMONSTRATED PROTOCOL (CG000136 • Rev E)

  • What is the cell fixation protocol with methanol?

    Cells are usually plated one day prior to staining in order to achieve 60-80% confluency.
    Fix the cells with 100% methanol for 10 minutes at -20°C.
    Note: optimal fixation time and reagent depends on the antigen of interest and must be optimized.

  • How long does it take to fix cells in methanol?

    In a standard fixation protocol, ice-cold methanol is added to cells for 10-20 minutes at 4˚C.

  • Alcohol fixatives, such as ethanol and methanol, work by dehydration, causing proteins to denature and precipitate in-situ [12].5 jui. 2021

  • How does methanol work as a fixative?

    The fixation obtained with methanol is very similar to that of ethanol.
    It is a non-additive precipitant fixative.
    It fixes proteins by dehydration and precipitation.
    Mixtures incorporating it are usually water free.

  • Procedure
    1. Carefully cover cells with methanol fix and incubate for 5 min at -20°C.
    2. Wash three times with PBS for 10 min.
    3. Incubate with blocking buffer for 30 min.
    4. Incubate in incubation buffer containing the primary antibody (for appropriate dilution, refer to the data sheet) for 2 h at RT.
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