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Scientific Tools in Biological Assays

Principles of Cell Cultures and Genetics

Day 1

17 th March

8:45Welcome Alexandra Brito, FFUL, Portugal

9:00Human genome: from basics to disease (T)Isabel Rivera, FFUL, Portugal

9:45 Epigenetics in health and disease (T)Paul Peixoto, UniversitéBourgogne Franche-Comté, France

10:30 Break

11:00 Pharmacogenetics: from principles to biomarkers and personalized medicines(T) Elsa Rodrigues, FFUL, Portugal

11:45 Proteogenomicsand its applications to biology and precision medicine (T) Rahman Jamal, UniversitKebangsaan, Malaysia

12:30 Lunch

13:45Challenges and emerging directions in single-cell analysis(T) Guo-Cheng Yuan, HarvardChan School of Public Health, USA

14:30 Genome editing: tools and principles (T)Manuel Gonçalves, Leiden UniversityMedical Center, TheNetherlands

15:15 High-throughput and high-content screening technologies for RNA-based therapies (T)Miguel Mano, University

of Coimbra, Portugal

16:00 Break

16:30 Why Networks Matter: Embracing Biological Complexity (T) John Quackenbush, Harvard TH Chan School of

Public Health, USA

17:15 Bioinformatic tools in genome analysis(P) Filipa Vale, FFUL, Portugal

18:00 End of session

Faculty

of

Pharmacy

(FF),

University

of

Lisbon

(UL), Portugal March 17 -

19, 2022

Website: https://www.ff.ulisboa.pt/https://www.ff.ulisboa.pt/?lang=en

Day 3

19 th March

9:00Evaluation of genetic modulation efficiency: immunocytochemistry (P; VL) Ana Rita Garcia, FFUL, Portugal

9:45 Evaluation of genetic modulation efficiency: in situ hybridization (P; VL) Joana Godinho-Pereira, FFUL, Portugal

10:30 Break

11:00 Evaluation of genetic modulation safety and efficacy: viability and migration (P; VL) Ana Rita Garcia, FFUL, Portugal

11:45 Genomic assay: single cell and spatial transcriptomics (T) Kyoung Jae Won, Universityof Copenhagen, Denmark.

12:30Course assessment and closingAlexandra Brito, FFUL, Portugal

Organization

Alexandra Brito

FFUL

Joana Pereira

FFUL

Rita Garcia

FFUL Contact: Alexandra Brito (Coordinator) mariabrito@campus.ul.pt

Day 2

18 th

March

9:00MicroRNAs: small but powerful regulators of gene expression (T)Marta Olejniczak, Polish Academy of Sciences,

Poland

9:45MicroRNAs as biomarkers and therapeutic targets(T) Alexandra Brito, FFUL, Portugal

10:30 Break

11:00 MicroRNAs as players in brain pathology (T) Eleonora Aronica, University of Amsterdam, The Netherlands

11:45RNA interference technology to overcome cancer chemoresistance using non-viral vectors for assisting

siRNA uptake by malignant cells (T) AmáliaS Jurado, University of Coimbra, Portugal

12:30 Lunch

13:45 Next generation sequencing analysis of miRNAs (P)Jessy Slota, University of Manitoba, Canada

14:30 Basics onto genetic tools: genetic engineering and recombinant plasmid construction (P) Madalena

Pimentel, FFUL, Portugal

15:15 Bacterial plasmid production: competent bacteria transformation and plasmid DNA purification (P; VL) Inês

Figueira, CEDOC, Portugal

16:00 Break

16:30Basics in cell cultures: human and mouse cell lines (P; VL) Rafaela Silvestre, FFUL, Portugal

17:00Gene modulation: siRNA and plasmid transfection (P; VL) Sara Caetano, FFUL, Portugal

17:30 Molecular biology tools: RNA extraction and quantification, cDNA synthesis and RT-qPCR) (P; VL) Joana

Godinho-Pereira, FPUL, Portugal

18:00End of session

Fully online sessions

Theoretical(T): 9.75 h

Practical(P): 4.5 h

Virtual Lab(VL): 2.25 h

Total: 16.5 h

Officiallanguage: English

Timetable: Western EuropeanTime

Recordedsessions: available1 week

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