Charles C. Pugh - Real Mathematical Analysis
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Charles C. Pugh - Real Mathematical Analysis
Page 1. Undergraduate Texts in Mathematics. Charles C. Pugh. Real. Mathematical. Analysis If so real analysis could be your cup of tea. In contrast to ...
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Eur. Phys. J. Plus (2020) 135:378
https://doi.org/10.1140/epjp/s13360-020-00392-xRegular ArticleMathematical analysis for a new nonlinear measles
epidemiological system using real incidence data from PakistanZaibunnisa Memon
1,a ,SaniaQureshi 1 , Bisharat Rasool Memon 2 1 Department of Basic Sciences and Related Studies, Mehran University of Engineering and Technology,Jamshoro, Sindh 76062, Pakistan2
Institute of Information and Communication Technology, University of Sindh, Jamshoro, Pakistan Received: 17 February 2020 / Accepted: 7 April 2020 / Published online: 28 April 2020 © Società Italiana di Fisica and Springer-Verlag GmbH Germany, part of Springer Nature 2020 AbstractModeling of infectious diseases is essential to comprehend dynamic behavior for the transmission of an epidemic. This research study consists of a newly proposed math- ematical system for transmission dynamics of the measles epidemic. The measles system is based upon mass action principle wherein human population is divided into five mutu- ally disjoint compartments: susceptibleS(t)vaccinatedV(t)exposedE(t)infectious in Pakistan, the system has been validated. Two unique equilibria called measles-free and endemic (measles-present) are shown to be locally asymptotically stable for basic repro- ductive number R 0 <1andR 0 >1, respectively. While using Lyapunov functions, the equilibria are found to be globally asymptotically stable under the former conditions on R 0 measles-freeequilibriumforR 0 is presented. The forward sensitivity indices for R 0 are also computed with respect to the estimated and fitted biological parameters. Finally, numerical simulations exhibit dynami- cal behavior of the measles system under influence of its parameters which further suggest improvement in both the vaccine efficacy and its coverage rate for substantial reduction in the measles epidemic.1 Introduction
Measles is a highly contagious respiratory disease caused by a virus in the Paramyxoviridae family [1,2]. Clinical symptoms include high fever, cough, conjunctivitis, rhinitis, Koplik"s spots and maculopapular rash. The incubation period for measles is 10-14 days, and the infected individuals usually recover in three weeks of illness without undergoing any com- plications. However, people suffering from malnutrition or vitamin A deficiency are prone to diarrhea, pneumonia, ear infection, blindness and inflammation of brain [3]. Despite being vaccine preventable, measles continues to pose a serious concern for global health management. The disease has been a primary cause of morbidity and mortality among young children under five years of age. The world has faced measles epidemic several times. a e-mail:zaib.memon@faculty.muet.edu.pk(corresponding author) 123378Page 2 of 21 Eur. Phys. J. Plus (2020) 135:378
California faced measles epidemic between 1988 and 1990 with over 16,000 cases and more than 70 deaths reported [4]. In 2018, Madagascar was affected by measles outbreak which infected 50,000 people and resulted in about 300 deaths, majority of them being children [5]. According to World Health Organization (WHO), measles caused more than140,000 deaths in 2018. Although vaccination has resulted in a 73% drop in measles deaths
worldwide between 2000 and 2018, measles is still prevalent in the developing countries in Asia and Africa [6]. The majority of measles-related deaths occur in countries with poor health infrastructures and low per capita incomes. Region [7]. There are recurrent measles outbreaks in the country every 8-10 years. In 2016, there were 2845 confirmed measles cases in Pakistan. This number surged to 6791 in 2017 and 33,007 in 2018. These figures account for about 44%, 20% and 51% of the total number of cases reported in the respective years in the Eastern Mediterranean Region comprising 22 countries. Around 130 children died from the disease in 2017, while the number rose to over300 in 2018 [8].
Immunization is regarded as one of the most cost-effective and successful public health interventions. The WHO recommends two doses of measles vaccine for all children. The first dose given to infants at nine months provides 85% immunity, while a second dose at the age of twelve months imparts 95% immunity to the disease. A Demographic and Health Survey conducted in Pakistan during 2017-2018 indicated the nationwide coverage of the first and second dose of measles vaccine at 73% and 67%, respectively. The survey illustrated the significant variation in the estimates of vaccine coverage among different provinces and federal areas in the country with Sindh (61%, 60%), Punjab (85%, 82%), Khyber Pakhtunkhwa (63%, 50%), Baluchistan (33%, 34%), Azad Kashmir (83%, 75%), Gilgit Baltistan (66%, 62%) and Federally Administered Tribal Areas (35%, 21%). These figures are well below the WHO recommended coverage of≥95% for both doses of the vaccine [9]. The epidemic models help to describe the mechanism of disease spread and evaluate strategies for the disease control. In recent decades, there has been a growing interest in the use of deterministic compartmental models to study the dynamics of measles and finding ways for its control and prevention. For example, in [10], the authors have taken into account that wider distancing between measles-infected and non-infected people proves effective in controlling the disease spread. Smith et al. [12] and Peter et al. [14] examined the role of vaccination on measles dynamics. Garba et al. [13] designed a deterministic model to assess the effect of vaccination and treatment on measles transmission. The effect of quarantine and treatment on measles spread is studied in [15]. Other significant contributions can be found in [16-19]. There are a number of case studies found in the literature related to mathematical study of measles, using deterministic models, focusing different regions of the world, for [26], Italy [27], Taiwan [28], Senegal [29] and Afghanistan [30]. The objective of present study is to find, via mathematical modeling, a public health strategy based on using vaccine for efficient control of measles in Pakistan. In particular, we aim to analyze the effect of vaccine efficacy and its coverage in preventing the disease spread in the country. Our motivation derives from a few studies [31-34] in the literature focused on deterministic modeling of measles disease in Pakistan. Each of these studies is based on a four-compartmental SEIR (S-susceptible, E-exposed, I-infectious and R-recovered) model, and none investigates the role of vaccine efficiency and its coverage rate on the disease control. The model in this study is an extension of SEIR model that includes a separate 123Eur. Phys. J. Plus (2020) 135:378 Page 3 of 21378
compartment V for the vaccinated class. The SVEIR model is based on the assumption of continuous vaccination. The findings of present study may assist government and public health authorities in formulating strategic vaccination plans to deal with the immunization gaps and thus prevent measles outbreaks. This paper is organized as follows. In Sect.2, model is formulated and estimates are of backward bifurcation, local and global stability. Section4discusses herd immunity, while a discussion on sensitivity analysis is carried out in Sect.5. In Sect.6, numerical simulations are presented to study the effects of various model parameters on the dynamics of measles infection. Conclusion and future research directions are given in Sects.7and8, respectively.2 Model description
susceptible (S), vaccinated (V), asymptomatic or exposed (E), symptomatic or infectious (I) and recovered (R). A flow diagram for the model is given in Fig.1.The equations describing the model are:
dS dt=?-βSI-(ξ+μ)S, dV dt=ξS-(1-τ)βVI-μV, dE dt=βSI+(1-τ)βVI-(α+μ)E, dI dt=αE-(δ+μ)I, dR dt=δI-μR,(2.1) SE V IR (1-τ) Fig. 1Flow diagram for measles model specified in (2.1) 123378Page 4 of 21 Eur. Phys. J. Plus (2020) 135:378
with force of infectionλ=βI.In(2.1),?denotes the recruitment rate and keeps the total populationNa constant,βthe effective contact rate,ξthe vaccination coverage rate,τthe vaccine efficiency,μthe natural mortality rate,αthe rate of developing clinical symptoms andδthe recovery rate . In this study, the vaccine is assumed to be imperfect, i.e., it does not contact with symptomatic individuals. Note that, 0<τ<1(τ=1 means perfect vaccine, whileτ=0 represents a vaccine that offers no protection at all). The initial conditions of the model (2.1) are of the form It can be easily shown that the solution of model (2.1) subject to the initial conditions (2.2) exists and is nonnegative for allt≥0. Further, (S,V,E,I,R)?R 5+ (2.3) is the positively invariant region for the model (2.1).2.1 Parameters estimation and curve fitting
One of the most important steps to be taken during model validation is the use of real data (if available) which assists to get values of some unknown biological parameters used in the epidemiological model under study. In this connection, real measles incidence cases as given in Table1are used for validation of the proposed measles model and also to obtain best fitted values of some unknown biological parameters that occur in the model. For the model in present research analysis, there are seven parameters among which four are to be fitted, years (1.253133e-03 per month) according to WHO data (year-2018) and the population of Pakistan in 2018 is 207862518 and in this way, the recruitment rate is estimated to be ?=207862518×μ≈260479. Further, it is also known from [35] that the measles vaccine is about 97% effective; therefore, the vaccine efficacyτis estimated to be 0.97. In addition to these estimated values, values of other parameters are mentioned in Table2where the parametersβ(contact rate),δ(recovery rate),α(rate of developing clinical symptoms) and ξ(vaccination coverage rate) are obtained through parameter estimation technique under lsqcurvefitroutine via MATLAB software. The simulation results obtained for the measles incidence cases by fitting the proposed model (2.1) with the real statistics of the first 10 months of 2019 are shown in Fig.2along with the respective residuals as depicted in Fig.3. Figure2presents a reasonably good fit thereby including reality to the predictions obtained from the proposed measles model (2.1). The associated average relative error of the fit using the formula 1 10? 10k=1 ???xrealk -x approximate k x realk ???≈1.4685e-01 is used to measure goodness of the fit which is further confirmed by reasonably small relative error"s value (1.4685e-01). Table 1Real statistics of measles infected cases from January to October 2019 in Pakistan [36]Jan Feb Mar Apr May June July Aug Sep Oct
237 252 397 399 276 168 70 28 23 19
123Eur. Phys. J. Plus (2020) 135:378 Page 5 of 21378
Table 2Biological parameters used in the proposed epidemic model of measlesParameter Description Value Source
?Recruitment rate of susceptible humans 260,479 EstimatedμNatural mortality rate 1.253133e-03 Estimated
τEfficacy of vaccine 0.97 Estimated
βMeasles contact rate 1.60056e-07 Fitted
δRecovery rate 9.3408 fitted
αRate of developing clinical symptoms 9.2373e-01 FittedξVaccination coverage rate 5.8306e-01 Fitted
02468time (months)
050100150200250300350400450
infectious real statistics fitted curve Fig. 2Fitting the proposed measles model to the real statistical data using parameters from Table23 Equilibria and stability
3.1 Disease-free and endemic equilibrium points
X 0 by equating to zero the right side of equations in system (2.1)as X 0 =(S 0 ,V 0 ,E 0 ,I 0 ,R 0 +μ,ξ?µ(+μ),0,0,0? .(3.1)Next,wecomputethebasicreproductiveratio
R 0 usingonlythetwoequationscorresponding to compartmentsEandIfromsystem(2.1) using the next-generation matrix method [37]. 123378Page 6 of 21 Eur. Phys. J. Plus (2020) 135:378
02468time (months) -100-80-60-40-20020406080100 residuals Fig. 3Residuals for the proposed model using parameters from Table2 -1 wherethematrixFrepresents the rate of infection transmission in these compartments, and the matrixVdescribes all other transfers across the compartments. The matricesF,VandV -1 are given as F=? 0
β?[μ+(1-τ)ξ]
00?V=?μ+α0
V -1 1 0 (µ+α)(μ+δ)1μ+δ The basic reproductive ratio, defined as the spectral radius of the matrixFV -1 , is obtained as R 0 =ρ(FV -1 )=αβ?[μ+(1-τ)ξ]It is easy to prove that if
R 0 >1, in addition to the disease-free equilibrium pointX 0 ,system (2.1) also has an endemic equilibrium pointX =(S ,V ,E ,I ,R ), with 123Eur. Phys. J. Plus (2020) 135:378 Page 7 of 21378
S I V (I +ξ+μ)[(1-τ)βI E I I =-A 2 +?A 22-4A 1 A 3 2A 1 R µI ,(3.3) where A 1 2 (1-τ), A 2
1+(1-τ)
µ+(1-τ)ξ?
1- R 0 +(1-τ)ξ A 3 =μ(ξ+μ)(1-R 0 ).(3.4)3.2 Backward bifurcation analysis
R 0 <1.Evaluatingforceofinfection λat the endemic equilibrium yields following quadratic equation: aλ 2 +bλ+c=0,(3.5) with a=4β 2 (1-τ) 2 b=2β 2 2 (1-τ) 2 3 ?(1-τ) 2 c=4β 2μ(1-τ)(ξ+μ)
2 (α+μ)(δ+μ)(1-R 0Hence, the following theorem is established:
Theorem 3.1The model(2.1)has
(i)a unique endemic equilibrium state if c<0, (ii)a unique endemic equilibrium if b<0and c=0or b 2 -4ac=0, (iii)two endemic equilibria if b<0,c>0and b 2 -4ac>0, (iv)no endemic equilibrium otherwise.Clearly,a>0andc>or<0 according to
R 0μ(1-τ)(ξ+μ)
2 (α+μ)(δ+μ). Therefore, backward bifurcation occurs for R c0378Page 8 of 21 Eur. Phys. J. Plus (2020) 135:378
3.3 Stability of equilibrium points
3.3.1 Local stability
Theorem 3.2The disease-free equilibrium X
0 is locally asymptotically stable ifR 0 <1 and unstable if R 0 >1.ProofThe Jacobian matrix of the system (2.1)atX
0 ,0,0,0? is J(X 0 ??-(ξ+μ)00 0ξ-μ0
-(1-τ)βξ? 000-(α+μ)
β?(μ+(1-τ)ξ)
000α-(μ+δ)0
000δ-μ?
It is easy to verify that three of the eigenvalues ofJ(X 0 )areλ 1 =-(ξ+μ) <0,λ 2 3 two eigenvaluesλ 4 andλ 5 can be obtained from the equationβ?(μ+(1-τ)ξ)
????=0, which gives a quadratic equation 2 0 )=0,(3.6) withλ 4 andλ 5 as its roots satisfying the following: 4 5 =-(α+δ+2μ) <0, 4 5 =(α+μ)(δ+μ)(1-R 0 ).(3.7) 4 andλ 5 havenegativerealpartsprovided R 0 <1. This proves stability ofX 0 .IfR 0 >1, one ofλ 4 andλ 5 has positive real part. In this case,X 0 is unstable.??Theorem 3.3The endemic equilibrium X
is locally asymptotically stable ifR 0 >1.ProofThe Jacobian matrix of system (2.1)atX
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