A quick overview of the S4 class system
Implementing an S4 class (in 4 slides) The S4 class system is a set of facilities provided in R for OO ... From using an object constructor function.
A (Not So) Short Introduction to S4 V0.5.1
20 août 2008 This tutorial is a guide to object programming with R (or S4). It does not require ... The most important one is called the constructor.
Implementing S4 objects in your package: Exercises
18 févr. 2011 A constructor so we can create GWASdata instances. A common practise is to define an ordinary function named like the class itself for this.
Package textgRid
21 sept. 2016 IntervalTier-class IntervalTier-constructor
Object-Oriented Programming in R: S3 S4
https://canvas.uw.edu/files/27543632/download?download_frd=1&verifier=ZJCPzuqXFNAeylXt159H1cUvBOyamBmvRIh8ywmq
objectSignals: Observer Pattern for S4
5 avr. 2022 for the constructor/initializer to explicitly create the signal. ... a default value for a field in the vein of prototype for S4 classes
memuse: Memory Estimation Utilities
20 oct. 2021 Constructor for objects of class memuse. Usage mu(size unit = "best"
A brief overview of the S4 class system
18 févr. 2011 The S4 class system is a set of facilities provided in R for OO programming. ... From using a specialized high-level constructor.
R7 > S3 + S4 and Bioconductor
S4 library(rtracklayer) loads. 129 classes. 1114 generics and. 6304 methods The class object is the constructor: object <- text(“hi”).
R7 > S3 + S4 and Bioconductor
S4 library(rtracklayer) loads. 129 classes. 1114 generics and. 6304 methods The class object is the constructor: object <- text(“hi”).
A (Not So) Short Introduction to S4 - The Comprehensive R
S4 is the 4thversion of S S is a language that has two implementation: S-plus is com- mercial R is free The main characteristic of S4 compared to S3 is the development of functions which allow to consider S as an object language1 By extension S4 stand for object oriented programming with S
R S4 Class - Tutorial And Example
Dec 13 2013 · gene lists of the corresponding row and column This class calls the GeneOverlap constructor to create objects that represent the overlapping information When there is only one gene set the matrix represents the self-comparison within the gene set and only the upper triangular matrix is used
SpatialExperiment: S4 Class for Spatially Resolved -omics Data
Title S4 Class for Spatially Resolved -omics Data Description Defines an S4 class for storing data from spatial -omics experiments The class extends SingleCellExperiment to support storage and retrieval of additional information from spot-based and molecule-based platforms including spatial coordinates images and image metadata
pscore: Standardizing Physiological Composite Risk Endpoints
An constructor function for the S4 CompositeReady class Description An constructor function for the S4 CompositeReady class Usage CompositeReady(datacovmatsigmastandardizeuse prethresholddistancesdistanceDensitywinsorizedValuesbetterrawdatagroupsthresholdshigherisbetterkrawtrans) Arguments distances
Battalion Sustainment Planning Trends at JRTC - MCoE
S4 positions in infantry battalions are coded for Infantry officers specifically because they are most familiar with the expenditures of all classes of supply required for specific tactical operations not because they are technical experts in sustainment execution During a recent defense the S4 took an overly broad
Searches related to s4 constructor filetype:pdf
this s4 = s4;} // constructor Quad // Utility Method called perim: computes perimeter // Service method called print: // obtains perimeter from perim and prints value
How to create an S4 object?
- To create an S4 object we have to use the new () function. # create an object using new () # provide the class name and value for slots s
Package 'objectSignals"
October 14, 2022
LicenseGPL (>= 2)
MaintainerMichael Lawrence
TitleObserver Pattern for S4
AuthorMichael Lawrence, Tengfei Yin
DescriptionA mutable Signal object can report changes to its state, clients could register functions so that they are called whenever the signal is emitted. The signal could be emitted, disconnected, blocked, unblocked, and buffered.DependsR (>= 2.12)
Importsmethods
Version0.10.3
CollateSignal-class.R utils.R
NeedsCompilationno
RepositoryCRAN
Date/Publication2022-04-05 06:00:02 UTC
Rtopics documented:
declareSignal . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 fieldWithPrototype . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2 Signal-class . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3 Index6declareSignalDeclaring a signal fieldDescriptionDeclares a signal field that is lazily populated when the field is first accessed. This avoids the need
for the constructor/initializer to explicitly create the signal. 12fieldWithPrototype
Usage declareSignal(expr)Arguments
exprThe expression that names the signal and specifies its signature. See the exam- ple. Value A list of field definitions, suitable for passing tosetRefClass.Author(s)
Michael Lawrence
Examples
setRefClass("Dataset", fields = c(elements = "list", declareSignal(elementsChanged(which))))fieldWithPrototypeFields with prototypesDescription A convenience for declaring a default value for a field, in the vein ofprototypefor S4 classes, except the default value is quoted and evaluated lazily. Usage fieldWithPrototype(name, class, value)Arguments
nameThe name of the field classThe class of the field valueDefault value that when evaluated initializes the field ValueA list suitable for use withsetRefClass
Author(s)
Michael lawrence
Signal-class3
Examples
Brush.gen <- setRefClass("Brush",
fields = fieldWithPrototype("color", "character", "red")) brush <- Brush.gen$new() brush$color brush$color <- "blue" brush$colorSignal-classSignal objectsDescription Creates aSignalobject, with which a mutable object can report changes to its state. Interestedclients register a function that is called whenever the signal is emitted. This allows those clients to
respond to changes in the object state.Details
ASignalobject is usually created by a constructor and stored as a field in a reference class object. Clients then access the signal either directly or through an accessor. TheSignalreference class has the following methods: connect(FUN, namedArgs = FALSE, ...)ConnectFUNas a handler for the signal. A unique iden- tifier is returned, which can be used to later disconnect the handler. Handler invocation follows these rules: •namedArgs=TRUEarguments are named in call to handler. Otherwise, they are unnamed and matching is by position. If a handler i smissing a signal ar gument,the ar gumentis dropped when calling the han- dler. A handler may ha vear gumentsnot in the signal signature.Ar gumentsin ...are appended to the handler call.
disconnect(id)Disconnects the handler registered with the identifierid. emit(4Signal-class
accumulator(value)If called with no arguments, get the function, if any, used to combine events in the buffer into a single event. Otherwise,valuereplaces the current function. The accumu- lator function should take one or two arguments. If it takes one argument, it is invoked upon a flush and is passed the list of events in the buffer. An event is simply a list containing the arguments passed toemit. If the accumulator function takes two arguments, the function is invoked upon every emission, when buffering is active and there is one event in the buffer. The first argument is the currently buffered event and the second is the new event that the function should merge into the first. The returned event then replaces the event in the buffer.Constructor
•Signal(...)Create an instance of the reference classSignal ...Arguments that express the signature of the signalAccessors
•length(x): The number of listeners in signal x. •listeners(object): A list of listeners in signal x.Author(s)
Michael Lawrence, Tengfei Yin
Examples
Signal(x, y)
signal <- Signal(x, y, z = NA) signal$connect(function(n, x, option = "none") message("x:", x), namedArgs = TRUE) signal$connect(function(z, ...) message("z:", z, " x:", list(...)$x), namedArgs = TRUE) signal$emit(0, 1) signal$connect(function(x, y, option = "none") message("y:", y, " op:", option), TRUE) signal$connect(function(x, y, option = "none") message("op:", option), option = "test") signal$connect(function(x, y, option = "none") message("op:", option), FALSE, "test") id <- signal$connect(function(x, y, option = "none") message("op:", option), TRUE, "test") signal$emit(0, 1) signal$disconnect(id) signal$emit(0, 2) signal <- Signal(x) signal$connect(function(i) print(i)) signal$block()Signal-class5
signal$emit(0) signal$unblock() signal$emit(0) signal$buffer() signal$emit(0); signal$emit(1); signal$emit(3) signal$flush() signal$accumulator(function(prev, cur) { prev$x <- c(prev$x, cur$x) prev signal$buffer() signal$emit(0); signal$emit(1); signal$emit(3) signal$flush() ## accessors length(signal) listeners(signal) Index class:Signal(Signal-class),3 declareSignal,1 fieldWithPrototype,2 length,Signal-method(Signal-class),3 listeners(Signal-class),3 listeners,Signal-method(Signal-class), 3 prototype,2 setRefClass,2Signal(Signal-class),3
Signal-class,3
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