[PDF] Mathematical analysis of a three-tiered food-web in the chemostat





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Mathematical analysis of a three-tiered food-web in the chemostat

27 oct. 2020 Key words and phrases. Anaerobic digestion bifurcation diagram



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Mathematical analysis of a three-tiered food-web in the chemostat

Manuscript submitted to doi:10.3934/xx.xxxxxxx

DISCRETE AND CONTINUOUS DYNAMICAL SYSTEMS SERIES B

VolumeX, Number0X, XX200Xpp.X{XX

MATHEMATICAL ANALYSIS OF A THREE-TIERED FOOD-WEB

IN THE CHEMOSTAT

Sarra Nouaoura

aand Radhouane Fekih-Salema;c

Nahla Abdellatif

a;d;and Tewfik Sarib a University of Tunis El Manar,National Engineering School of Tunis,LAMSIN,1002,Tunis,Tunisia bITAP, Univ Montpellier, INRAE, Institut Agro, Montpellier, France cUniversity of Monastir, Higher Institute of Computer Science of Mahdia, 5111, Mahdia, Tunisia dUniversity of Manouba, National School of Computer Science, 2010, Manouba, Tunisia (Communicated by the associate editor name) Abstract.A mechanistic model describing the anaerobic mineralization of chlorophenol in a three-step food-web is investigated. The model is a six- dimensional system of ordinary dierential equations. In our study, the phenol and the hydrogen in owing concentrations are taken into account as well as the maintenance terms. The case of a large class of growth kinetics is considered, instead of specic kinetics. We show that the system can have up to eight types of steady states and we analytically determine the necessary and sucient conditions for their existence according to the operating parameters. In the particular case without maintenance, the local stability conditions of all steady states are determined. The bifurcation diagram shows the behavior of the process by varying the concentration of in uent chlorophenol as the bifurcating parameter. It shows that the system exhibits a bi-stability where the positive steady state can lose stability undergoing a supercritical Hopf bifurcation with the emergence of a stable limit cycle.

1.Introduction.The chemostat model is widely used in microbiology and ecology

as a mathematical representation of the continuous culture of micro-organisms, that is, the growth of micro-organisms in ecosystems that are continuously fed with nutrients [ 18 20 30
]. Several textbooks on the mathematical analysis of this model with one and more species are available [ 17 27
]. The chemostat model predicts that coexistence of two or more microbial populations competing for a single non- reproducing nutrient is not possible. Only the species with the lowest `break-even' concentration survives. This result, known as the Competitive Exclusion Principle (CEP), has a long history in the literature of bio-mathematics and the reader may consult [ 22
] and the references therein. Although the theoretical prediction of the CEP has been corroborated by the experiences of Hansen and Hubell [ 16

], the biodiversity found in nature as well as2010Mathematics Subject Classication.Primary: 34A34, 34D20; Secondary: 92B05, 92D25.

Key words and phrases.Anaerobic digestion, bifurcation diagram, chemostat, coexistence, sta- bility, three-tiered food-web. This work was supported by the Euro-Mediterranean research network TREASURE (http: //www.inra.fr/treasure).

Corresponding author:Nahla Abdellatif.

1

2 NOUAOURA AND FEKIH-SALEM AND ABDELLATIF AND SARI

in biological reactors seems to contradict the CEP. This has led to a great deal of mathematical research aimed at extending the chemostat model to better match theory and observations. Among the mechanisms that promote the coexistence of species, we can cite : the crowding eects (see [ 1 8 ] and the references therein), the role of density-dependent growth functions (see [ 15 ] and the references therein), more complex food webs (see [ 2 19 33
] and the reference therein), the presence of inhibitors that aects the strongest competitor (see [ 3 9 10 32
], and the references therein), the commensalistic relationship where a second species (the commensal) needs the rst one (the host) to grow while the host species is not aected by the growth of the commensal one (see [ 5 6 11 26
] and the references therein), the syntrophic relationship where two microbial species depend on each other for survival (see [ 7 12 14 23
24
34
] and the reference therein). Some of these models were constructed to have a better understanding of anaero- bic digestion (AD), which is an important process used in the treatment of wastew- ater and waste, including a large number of species that coexist in a very complex relationship. The full anaerobic digestion model (ADM1) developed in [ 4 ] includes

32 state variables and a large number of parameters. Therefore, the qualitative

analysis and the control of this model are very dicult because of its complexity and its dependence on many operational variables. The so-called AM2 model devel- oped in [ 6 ] represents a two-tiered food-web and provides satisfactory prediction of the AD process by using the parameter identication theory and experimental data. In [ 14 ], a three-tiered food-web model including enzymatic degradation of a sub- strate and commensalistic relationship is considered. In [ 31
], the authors consider a three-tiered food-web with three microbial species (chlorophenol and phenol de- graders and hydrogenotrophic methanogen) that encapsulates the essence of the AD process. The corresponding model represents an extension of the model describing the interactions between propionate degraders and hydrogenotrophic methanogens in a two-tiered feeding chain [ 34
]. For a recent review of mathematical modeling of anaerobic digestion, the reader is refereed to [ 29
The aim of our paper is to consider the three-tiered microbial `food-web', devel- oped in [ 31
] which is written as follows:8>>>>>>>>>< >>>>>>>>:_

Xch= (Ychf0(Sch;SH2)Dkdec;ch)Xch_Xph= (Yphf1(Sph;SH2)Dkdec;ph)Xph_XH2= (YH2f2(SH2)Dkdec;H2)XH2_Sch=DSinchSchf0(Sch;SH2)Xch

_Sph=D S inphSph

224208

(1Ych)f0(Sch;SH2)Xchf1(Sph;SH2)Xph _SH2=DSinH

2SH216208

f0(Sch;SH2)Xch+32224 (1Yph)f1(Sph;SH2)Xph f2(SH2)XH2;(1) whereXch,XphandXH2denote, respectively, the chlorophenol, phenol and hydro- gen degrader concentrations;f0,f1andf2are the corresponding growth rates;Sch, S phandSH2are the chlorophenol, phenol and hydrogen substrates concentrations; S inch;SinphandSinH

2are the substrate concentrations in the feed bottle;kdec;ch;kdec;ph

andkdec;H2represent the decay rates;Dis the dilution rate of the chemostat;Ych, Y phandYH2are the yield coecients. The choice of the application of chlorophenol-mineralising food-web in [ 31
] is due to the availability of experimental data but the study of model ( 1 ) applies to any other similar microbial food chain. Indeed, the parameter values related to hydrogen are deduced from that of ADM1 [ 4 ]. For chlorophenol and phenol, they

A THREE-TIERED MODEL 3

were chosen based on a combination of literature data (see [ 31
] and the references therein). Recently, a rigorous mathematical analysis of this model ( 1 ) was done in 25
] with general growth rates but only the chlorophenol in owing concentration has been taken into account. Using the linear change of variables given by ( 7 ) and 8 ), model ( 1 ) can be written as follows:

8>>>>>><

>>>>>:_x0= (0(s0;s2)Da0)x0 _x1= (1(s1;s2)Da1)x1 _x2= (2(s2)Da2)x2 _s0=Dsin0s00(s0;s2)x0 _s1=Dsin1s1+0(s0;s2)x01(s1;s2)x1 wheresi,i= 0;1;2 are the three substrates;xiare the three microbial species;i are the specic growth rates given by ( 9 );aiare the mortality rates;siniare the concentrations of the three substrates in the feed device. All the yield coecients in ( 1 ) are normalized to one except of!. In [ 25
], system ( 2 ) can have at most three types of steady states whensin0>0 andsin1=sin2= 0: the washout steady state, a coexistence steady state of three species and a steady steady state where only the hydrogen degrader is extinct. The local stability analysis is achieved when the maintenance is excluded from system 2 ) where this six-dimensional model is reduced to a three-dimensional one. A numerical evidence shows that, when maintenance is included, the positive steady state can destabilize through a supercritical Hopf bifurcation with the appearance of a stable periodic orbit [ 25
]. In [ 28
], when maintenance is excluded, the emergence of a supercritical Hopf bifurcation was analytically determined. In [ 13 ], the three- tiered model of [ 31
] was studied by neglecting the part of hydrogen produced by the phenol degrader and the mortality rates. When in addition tosin0>0, the phenol and hydrogen in owing concentrations are taken into account (sin1>0 andsin2>0), it was proven in [31] that system 1 ) can have up to eight steady states, a fact that was conrmed in [ 13 ] and [ 28
when a larger class of growth functions is considered, but the maintenance terms are neglected. In [ 31
] most of the results on the existence and stability of steady states of model ( 1 ) were obtained only numerically.

In this paper, we generalize [

31
] by allowing a larger class of growth functions and by giving rigorous proofs for the results on the existence of steady states obtained in [ 31
] for system ( 1 ). For this class of growth function, we generalize [ 13 28
] by al- lowing maintenance terms and we generalize [ 25
] by allowing phenol and hydrogen in owing concentrations. More precisely, our main objective is to determine the existence of steady states of model ( 2 ) in the general case including maintenance and the in ow of the three substrates. Moreover, we analyze the asymptotic be- havior of the system without maintenance and we apply our theoretical results to the three-tiered microbial model ( 1 ). Actually, the results on the stability of steady state in [ 31
] were obtained when maintenance terms are included. In a forthcom- ing publication [ 21
], we study theoretically this case, where system ( 2 ) cannot be reduced to a three-dimensional one. The paper is organized as follows. The next section presents general assumptions for the growth rates and the mathematical analysis of the existence of steady states of model ( 2 ) with respect to the operating parameters. In Section 3 , the asymp- totic behavior analysis of ( 2 ) was done in the particular case without maintenance.

4 NOUAOURA AND FEKIH-SALEM AND ABDELLATIF AND SARI

Considering specic growth rates, numerical simulations are presented in Section 4 as an application of our theoretical results to model ( 1 ). Finally, conclusions are drawn in Section 5 . The proofs of all the propositions and theorems are reported in Appendix A . The parameter values and some auxiliary functions are presented in Tables in Appendix B

2.Assumptions and steady states.Considering model (2), we make the fol-

lowing general assumptions on the growth functions which are continuously dier- entiable (C1). (H1) For alls0>0 ands2>0, 0< 0(s0;s2)<+1,0(0;s2) = 0,0(s0;0) = 0. No growth can occur for speciesx0without substratess0ands2. (H2) For alls1>0 ands2>0, 0< 1(s1;s2)<+1,1(0;s2) = 0. No growth can occur for speciesx1without substrates1. (H3) For alls2>0, 0< 2(s2)<+1,2(0) = 0. No growth can occur for speciesx2without substrates2. (H4) For alls0>0 ands2>0,@0@s

0(s0;s2)>0;@0@s

2(s0;s2)>0.

The growth rate of speciesx0increases with substratess0ands2. (H5) For alls1>0 ands2>0,@1@s

1(s1;s2)>0;@1@s

2(s1;s2)<0.

The growth rate of speciesx1increases with the substrates1but is inhibited by the production ofs2. (H6) For alls2>0,02(s2)>0. The growth rate of speciesx2increases with substrates2. (H7) The functions27!0(+1;s2) is monotonically increasing and the function s

27!1(+1;s2) is monotonically decreasing.

The maximum growth rate of the speciesx0andx1increases and decreases, respectively, with the concentration of substrates2.

First, we show that the solutions of model (

2 ) are nonnegative and bounded, which is a prerequisite for any reasonable model of the chemostat. Proposition 1.For any nonnegative initial conditions, all solutions of system (2) remain nonnegative and are bounded for allt>0. Moreover, the set =(x0;x1;x2;s0;s1;s2)2R6+:!x0+x1+x2+ 2s0+ 2s1+s262sin0+ 2sin1+sin2 is positively invariant and a global attractor for ( 2 A steady state exists (or is said to be `meaningful') if and only if all its compo- nents are nonnegative. This predicts eight possible steady states, labeled below as in [ 31
SS1 (x0= 0,x1= 0,x2= 0): the washout of all three microbial populations. SS2 (x0= 0,x1= 0,x2>0): only the hydrogen degraders are maintained. SS3 (x0>0,x1= 0,x2= 0): only the chlorophenol degraders are maintained. SS4 (x0>0,x1>0,x2= 0): only the hydrogen degraders are washed out. SS5 (x0>0,x1= 0,x2>0): only the phenol degraders are washed out. SS6 (x0>0,x1>0,x2>0): all three microbial populations are present. SS7 (x0= 0,x1>0,x2= 0): only the phenol degraders are present. SS8 (x0= 0,x1>0,x2>0): only the chlorophenol degraders are washed out. To determine these steady states, we need to dene some auxiliary functions that are listed in Table 1 . The existence and denition domains of these functions are all relatively straightforward and can be found as in [ 25
]. Following [ 25
], we add a hypothesis on the function which then assures that there are at most two steady

A THREE-TIERED MODEL 5

states of the form SS4. (H8) When! <1, the function has a unique minimums 2=s

2(D) on the intervals02;s12, such that@@s

2(s2;D)<0 ons02;s

2and@@s

2(s2;D)>0 ons

2;s12.

As we will show in Section

4 , this hypothesis (H8) is fullled with the specic growth rates ( 9 ). Now, we can state our main result. Table 1.Notations, intervals and auxiliary functions.

Denitions

i=Mi(y;s2) i= 0;1Lets2>0.si=Mi(y;s2) is the unique solution of i(si;s2) =y, for all 06y < i(+1;s2)s

2=M2(y)s2=M2(y) is the unique solution of

2(s2) =y, for all 06y < 2(+1)s

2=M3(s0;z)Lets0>0.s2=M3(s0;z) is the unique solution of

0(s0;s2) =z, for all 06z < 0(s0;+1)s

i2=si2(D) i= 0;1s i2=si2(D) is the unique solution ofi(+1;s2) =D+ai, for all

D+a0<0(+1;+1),1(+1;+1)

1,I2I1=D>0 :s02< s12,I2=D2I1:s02< M2(D+a2)< s12(s2;D)(s2;D) = (1!)M0(D+a0;s2) +M1(D+a1;s2) +s2,

for allD2I1ands02< s2< s12

1(D)1(D) = inf

s022(D)2(D) = (M2(D+a2);D), for allD2I2

3(D)3(D) =@@s

2(M2(D+a2);D), for allD2I2J

0,J1J0=max0;sin0sin2=!;sin0,J1=0;sin1

0(s0) 0(s0) =0s0;sin2!sin0s0, for alls0>max0;sin0sin2=!

1(s1) 1(s1) =1s1;sin2+sin1s1, for alls120;sin1+sin2'

i(D) i= 0;1' i(D) =Mi(D+ai;M2(D+a2)), resp., for all,

D2D>0 :s02< M2(D+a2),D2D>0 :M2(D+a2)< s12

Theorem 1.Assume that Hypotheses (H1) to (H6) hold. The steady states SS1, SS2,:::, SS8, of (2) are given in Table2 . Assume also that Hypothesis (H7) holds. The necessary and sucient conditions of existence of the steady states are given in Table 3 . When they exist, all steady states (except SS4) are unique.

If!>1, when it exists, SS4 is unique.

If! <1, assuming also that (H8) holds, the system has generically two steady states of the form SS4. Remark 1.If! <1, equation (s2;D) = (1!)sin0+sin1+sin2has two solutions s

12ands22if and only if (1!)sin0+sin1+sin2> 1(D), so that@@s

2s12;D<0

and @@s

2s22;D>0 (see Fig.1 ). We denote by SS41and SS42the steady states

of type SS4 corresponding tos12ands22, respectively. These steady states coalesce when (1!)sin0+sin1+sin2=1(D). In the particular cases, wheresin1= 0 orsin2= 0, some of the steady states described in Theorem 1 do not exist and the existence conditions of the existing steady states can be simplied. More precisely, we have the following result.

6 NOUAOURA AND FEKIH-SALEM AND ABDELLATIF AND SARI

Table 2.Steady states of (2). All functions are dened in Table1 . s

0,s1,s2andx0,x1,x2componentsSS1

s0=sin0,s1=sin1,s2=sin2andx0= 0,x1= 0,x2= 0SS2 s0=sin0,s1=sin1,s2=M2(D+a2) andx0= 0,x1= 0,x2=DD+a2sin2s2SS3 s1=sin1+sin0s0ands2=sin2!sin0s0, wheres0is a solution of

0(s0) =D+a0andx0=DD+a0sin0s0,x1= 0,x2= 0SS4

s

0=M0(D+a0;s2) ands1=M1(D+a1;s2), wheres2is a solution of

(s2;D) = (1!)sin0+sin1+sin2 andx0=DD+a0sin0s0,x1=DD+a1sin0s0+sin1s1,x2= 0SS5 s0='0(D),s1=sin1+sin0s0,s2=M2(D+a2) andx0=DD+a0sin0s0,x1= 0,x2=DD+a2sin2s2!sin0s0SS6 s0='0(D),s1='1(D),s2=M2(D+a2) andx0=DD+a0sin0s0, x

1=DD+a1sin0s0+sin1s1,x2=DD+a2(1!)(sin0s0) +sin1s1+sin2s2SS7

s0=sin0ands2=sin2+sin1s1, wheres1is a solution of 1(s1) =D+a1 andx0= 0,x1=DD+a1sin1s1,x2= 0SS8 s0=sin0,s1='1(D),s2=M2(D+a2) andx0= 0,x1=DD+a1sin1s1,x2=DD+a2sin1s1+sin2s2 Table 3.Existence conditions of steady states of (2). All func- tions are given in Table 1

Existence conditionsSS1

Always existsSS2

2sin2> D+a2SS3

0sin0;sin2> D+a0SS4

(1!)sin0+sin1+sin2>1(D),sin0> M0(D+a0;s2), squotesdbs_dbs30.pdfusesText_36
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