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Let's go ahead and load ggplot2 because we'll be using it a lot and create a histogram of the variable ideology_score. Remember that for each ggplot we have ( 



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BIOSTATS 640 2023 R Lesson 03 – Introduction to Data Visualization Using ggplot2 docx Page 9 of 18 Don’t forget to save your graph! How to Save Your Graph STEP 1: Attach the packags {ggplot2} library(ggplot2) STEP 2: Edit your R Script or your R Markdown code so as to create your graph as an object

How do you plot a histogram with ggplot in R?

  • If we want to create a histogram with the ggplot2 package, we need to use the geom_histogram function. The R code of Example 1 shows how to draw a basic ggplot2 histogram. Figure 1 visualizes the output of the previous R syntax: A histogram in the typical design of the ggplot2 package.

What are the advantages of using ggplot2 for creating a histogram?

  • If you need to create a histogram in R, I strongly recommend that you use ggplot2 instead. ggplot2 is a powerful plotting library that gives you great control over the look and layout of the plot. The syntax is easier to modify, and the default plots are fairly beautiful.

What is the best way to adjust the binwidth of a ggplot2 histogram in R?

  • The following R programming syntax shows how to increase the binwidth of the bars in a ggplot2 histogram. For this task, we can apply the binwidth argument of the geom_histogram function as shown below: ggplot ( data, aes ( x)) + # Increase binwidth geom_histogram ( col = "#1b98e0" , binwidth = 1)

What is the best way to plot a histogram with density in R?

  • If you need to create a histogram in R, I strongly recommend that you use ggplot2 instead. ggplot2 is a powerful plotting library that gives you great control over the look and layout of the plot. The syntax is easier to modify, and the default plots are fairly beautiful.

Histograms in RHistograms are a crucial tool for understanding the distribution of a single variable. In order for a histogram

to work well, the variable of interest should take on enough values to require "binning" or lumping several

values into the same column of the figure.

DW-NOMINATE Data

To see how histograms work, let"s work with estimates of the ideology of the U.S. House of Representatives.

These data are called DW-NOMINATE Scores and are available at voteview.com. The cleaned data

nominate.csvincludes the 100th through the 113th Congress and contains a variable calledideology_score

that indicates a representatives ideology for a particular Congress. Note that these data are at the legislator-

Congress level, so that each row in the data set is an individual legislator in a particular Congress. Smaller

values (i.e., more negative) indicate that a representative is more liberal and larger values (i.e., more positive)

indicate that a representative is more conservative. For example, the Ron Paul is one of the most conservative

representatives in the data set and has a score of about 1.3 (it varies across Congresses). Dennis Kucinich is

among the most liberal and has a score of about -0.7. To get started, let"s load the cleaned data.# load data nominate <- readr:: read_csv("data/nominate.csv") # note: make sure the file?nominate.csv?is in the?data?subdirectory # and your working directory is set appropriately. We can use theglimpse()function in the tibble package to check that the data loaded properly and get

a quick overview of the data. It shows use the variable names, let"s us know what type of variable we"re

working with (e.g., character, integer, double), and shows us the first few values.# quick look at the data

tibble::glimpse(nominate) ## Observations: 6,604 ## Variables: 6 ## $ congress 100, 100, 100, 100, 100, 100, 100, 100,... ## $ state "ALABAMA", "ALABAMA", "ALABAMA", "ALABA... ## $ congressional_district 1, 2, 3, 4, 5, 6, 7, 1, 1, 2, 3, 4, 5, ... ## $ party "Republican", "Republican", "Democrat",... ## $ name "CALLAHAN", "DICKINSON", "NICHOLS B", ... ## $ ideology_score 0.373, 0.398, -0.042, -0.213, -0.175, -...

I"ve given the variables very descriptive names, but if you need more information, you can find the codebook

at DW-NOMINATE"s data page.

Histograms

Now let"s try a histogram. To do this, we"ll need to load the R package ggplot2. Though ggplot2 is a complex

package, we"ll get some sense of how it works this semester. It is well-documented online, so feel free to read

about it as much as you want or need on your own.

There are three critical components to each plot created using ggplot2, which we"ll refer to as a 'ggplot."

1. the data: a formal data frame in R. 2.

the aesthetic: the relationship between the variables, specified in the call toggplot(). You can specify

how the data points vary in space, color, size, shape, etc. 1

3.the geometry: the t ypeof plot. There are other components, such as scales, facets, and coordinate systems, but these the three critical

components usually provide what we need.

Let"s go ahead and load ggplot2 because we"ll be using it a lot and create a histogram of the variable

ideology_score. Remember that for each ggplot, we have (at least) three elements. 1. data: the first argument toggplot(). Because the variable we want to plot,ideology_scoreis contained in the data framenominate, we usenominateas the first argument. 2. aesthetic: the second argument toggplot(). Because we want to create a histogram, we want value of ideology_scoreto correspond to the location along the x-axis. To create this correspondence, we use aes(x = ideology_score)as the second argument. 3. geometry: added toggplot(). Because we want to create a histogram, we want to use geom_histogram(). We simply add, using+, the desired geometries to the plot.# load package library(ggplot2) # specify data and aesthetic, then add the geometry ggplot(nominate,aes(x =ideology_score)) + geom_histogram() 0 200
400
600
-0.50.00.51.0 ideology_score count

This histogram makes sense. We have a grouping of Democrats (presumably) on the left and a grouping of

Republicans (again, presumably) on the right. If you wanted, you could probably come up with a model that

explains why we expect few politicians in the center. There are a few subtle points that I should emphasize about the lineggplot(nominate, aes(x = ideology_score)) + geom_histogram(). 1. The first argumen tsupplie dto ggplot()is the data. The second argument is the aesthetics. 2.

The second argument,aes(...)is itself a function. This function just creates the "aesthetic mapping,"

a link between the variables in the data set and space, color, size, shape, etc, in the chart.

3.geom_histogram()

is also a function, but it is added to the plot using+. We"ll see several other functions that can be added to the plot.

Review Exercises

1. List and describ ethe three criti calcomp onentsof a ggplot. 2. In the following snippet of code, label the data, the aesthetics, and the geometry:ggplot(nominate, aes(x = ideology_score)) + geom_histogram(). 3. In this section, we"ve seen three new functions:ggplot(),aes(), andgeom_histogram(). Describe what each one does and how to use it. 2

But it uses counts! What about density?Our textbook uses density on the y-axis, not counts. This is important, because if the bin widths of the

histograms are not equal, then counts would create a highly misleading histogram. However, if the bin widths

are equal, then counts and densities produce identical histograms. Also, we usually use equal bin widths in

practice. Therefore, as long as bin widths are equal, it doesn"t matter whether we use counts or densities.

You may have noticed thatgeom_hist()puts counts on the y-axis by default. If we want to change that default behavior, we can addy = ..density..to our aesthetics.geom_hist()assumes you wanty = ..count.. by default. In practice (i.e., with equal bin widths), it doesn"t matter. Let"s just go with counts when we"re making histograms with ggplot2.# specify data and aesthetic, then add the geometry ggplot(nominate,aes(x =ideology_score, y = ..density..)) + geom_histogram() 0.0 0.5 1.0 1.5 -0.50.00.51.0 ideology_score densitySubsets of Data Frames

But these ideology scores that we"re plotting go across 14 different Congresses (the 100th through the 113th).

Ideally, we"d plot just one at a time. To do that, rather than give the whole data set to theggplot(), we"ll

give a subset.

To create a subset of the original data set that only contains the 100th Congress, we"ll use thesubset()

function. For this function, the first argument is the data frame to be subsetted and the second arguments is

a logical statement that identifies the cases to be kept. If the logical statement isTRUE, then the case is kept.

If the logical statement isFALSE, then the case is dropped.# subset data to only 100th congress nominate100 <-subset(nominate, congress ==100 )

Literally, this means...

1. find a subset of the data framenominatewhere the variablecongressequals 100 (remember that we need double equals signs to test for equality), and 2. assign that new (smaller )data frame to nominate100. Now use just use the same code as before, but change the data frame. Rather than supplyingnominateas the first argument, we"ll supplynominate100.# create histogram for 100th congress ggplot(nominate100,aes(x =ideology_score)) + geom_histogram() 3 0 10 20 30
-0.40.00.40.8 ideology_score countNow let"s repeat that process, but for the 113th Congress. # subset data to only 113th congress nominate113 <-subset(nominate, congress ==113 ) # create histogram ggplot(nominate113,aes(x =ideology_score)) + geom_histogram() 0 10 20 30
40
-0.50.00.51.0 ideology_score countReview Exercises 1. Explain what thesubset()function does and how to use it. What are the first and second arguments?

2.Study the histograms of the ideology scores in the 100th and 113th Congresses. In what ways are they

similar? In what ways are they different? Why might that be?

Faceting

Let"s investigate this divergence in the parties more carefully.

Is the left hump actually Democrats? Is the right hump actually Republicans? To to that, we might apply

a facet to the histogram. A facet simply breaks the data frame into subsets and draws one histogram per

subset.

Create a facet by adding the functionfacet_wrap()to the plot. You"ll have to specify the faceting variable

as an argument to thefacet_wrap()function. In this case, we"ll do it byparty, adding+ facet_wrap(~ party)

(i.e., "create a facet by party") to the ggplot we"ve been using. Notice the tilde (~) in front of the

faceting variable.# build histogram ggplot(nominate100,aes(x =ideology_score)) + geom_histogram() + facet_wrap(~party) 4

DemocratRepublican

-0.40.00.40.8-0.40.00.40.8 0 10 20 30
ideology_score count

This is quite helpful. We see that our intuition was correct. The two humps in the previous histograms were

due to homogeneity within parties and heterogeneity between parties.

Review Exercises

1.

What do esa f acetdo to a plot?

2. Explain what the facet_wrap()function does and how to use it. 3. Supp oseI added + facet_wrap(party). Would that work? What is missing? 4. Suppose you+ facet_wrap( ~ state)toggplot(nominate100, aes(x = ideology_score)) + geom_histogram(). What would happen?

Density Plots

In the book, the authors sometimes use a rough sketch of a histogram using a smooth curve rather than a

complete histograms with vertical bars. For out purposes, a density plot is a smooth curve that approximates

a histogram.

We can easily create a density plot rather than a histogram by usinggeom_density()as the geometry rather

thangeom_histogram().# create density plot ggplot(nominate100,aes(x =ideology_score)) + geom_density() 0.0 0.4 0.8 1.2 -0.40.00.40.8 ideology_score densityReview Exercises 1. Ho wi sa densit yplot similar to and differen tfrom a histogram? 2. What do esthe function geom_density()do and how do you use it? 5

Color and Fill

ColorA density plot has the advantage it uses less ink. Because of this, we could use color rather than faceting to

distinguish Republicans and Democrats.

To use color to distinguish Republicans and Democrats, we simply addcolor = partyto the aesthetics, this

will draw two different colored lines for the density for Republicans and the density for Democrats.# build density plot

ggplot(nominate100, aes(x =ideology_score, color = party)) + geom_density() 0 1 2 -0.40.00.40.8quotesdbs_dbs5.pdfusesText_9
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