only five genes predicted a cell's position on the cell cycle continuum to within 14 of Seurat scores and the three Cyclone scores to cell cycle angles
611.full.pdf
15 mai 2019 · CellCycleScoring function in Seurat This function calculated the cell cycle score based on previously published canonical marker genes (
dev173476.pdf
14 jan 2022 · Add mapping and prediction scores from Azimuth to a Seurat object cc genes updated 2019 Cell cycle genes: 2019 update Description
Seurat.pdf
3 fév 2019 · (D) We inferred Seurat-based cell cycle phase in a continuum based on Seurat's cell cycle scores (for individual NA19098) (E) We compared the
526848.full.pdf
scLVM17, Seurat18, and ccRemover19 are based on linear repre- normalized enrichment score (NES) for cell-cycle genes of 1 57,
s41467-020-15295-9.pdf
30 nov 2021 · Create Seurat object, filter genes, check the quality of cells Compute cell cycle phase scores for each cell based on its expression of
scrnaseq2021.pdf
13 jui 2019 · Seurat v3 exhibited the highest silhouette scores Single-cell spatial reconstruction reveals global division of labour in the
S0092-8674(19)30559-8.pdf
Following the Seurat 3 0 pipeline, we selected the 2000 genes with the highest ran an alternative UMAP analysis by regressing out cell cycle scores
Supplementary_materials_and_methods_Mononen_et_al.pdf
24 mai 2021 · logical indicators, including the proportion of mitochondrial transcripts and cell-cycle phase scores For optimum visualization, a 20
btab404.pdf