2015-07-15 Supplementary Materials
To quantify splicing, the combination of EEJs that define each splicing event was created For the case of single exon skipping events, we generated EEJs for C1A, AC2 and C1C2 (A represents the alternative exon and C1 and C2 represent the neighboring constitutive exons), requiring a minimum of eight positions from each exon For multi-
UMARS: Un-MAppable Reads Solution
By our definition, the EEJs can be continuous or discrete The former represent known alternative splicing products The latter, however, represent novel alternative splicing isoforms
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